Protein Information

Protein ZmOrphan127
ZmOrphan127 is a protein in the Orphans family.
Information
Orphans Name:	ZmOrphan127
Species:	Maize
Orphans Family:	Orphans
Gene Name(Synonym):
Uniprot ID:	A0A1D6PDQ1
Subgenome:	2

Overview of domains present in v5 transcripts
	PF00481	PF13672
Zm00001eb112250_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d007264	DAPseq	sequence	fimo	position
Zm00001d007264	DAPseq	sequence	fimo	position
Zm00001d007264	ChIPseq	sequence	fimo	position
Zm00001d007264	PChIPseq	sequence	fimo	position

Zm00001eb112250_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MLLRTVRFLCSVVAAFARLVRELRKAGVMLSACSPSPVAILSAPTVPAASPINLIASTPLPKRKKTLARVAILENLLAAP
PTTLLPPSLVVGLPAKVSDVVSEAAMVEQQQAAQSLMKKASLAARRRPARLVIPVGDDAGEVAAGWGAAAAPAKEADVEV
EGEGFSLASRAGPRHAMEDAYAVVTDADSQLAFYGVFDGHGGRAAVDFVSERLSKNVVSAVLAAAGKDTRCEASSSGDDD
AVSAAIRAAYLATDSELLTQHQQGASGGACAATAVVKGGDLYVAHLGDCRVVLSREGAAVALTADHTCAAEDERARIERE
GGYVSRSGSGVWRVQGSLAVSRAFGDGALKQWVISEPAVTRVPLAAGCEFLVIASDGLWDKVSNQEAIDAVSGGRSRAAS
CRDLVDMARRRGSRDDVTVMVVDLQRFVR

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00481
PF13672
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Nucleotide Sequence
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GGCCTCCCATCGATCGTCTTCGTCT...

GRMZM2G342197_T01 from maize genome v3

Related TFome: pUT4972

Amino Acid Sequence
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MLLRTVRFLCSVVAAFARLVRELRKAGVMLSACSPSPVAILSAPTVPAASPINLIASTPLPKRKKTLARVAILENLLAAP
PTTLLPPSLVVGLPAKVSDVVSEAAMVEQQQAAQSLMKKASLAARRRPARLVIPVGDDAGEVAAGWGAAAAPAKEADVEV
EGEGFSLASRAGPRHAMEDAYAVVTDADSQLAFYGVFDGHGGRAAVDFVSERLSKNVVSAVLAAAGKDTRCEASSSGDDD
AVSAAIRAAYLATDSELLTQHQQGASGGACAATAVVKGGDLYVAHLGDCRVVLSREGAAVALTADHTCAAEDERARIERE
GGYVSRSGSGVWRVQGSLAVSRAFGDGALKQWVISEPAVTRVPLAAGCEFLVIASDGLWDKVSNQEAIDAVSGGRSRAAS
CRDLVDMARRRGSRDDVTVMVVDLQRFVR

Nucleotide Sequence
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ATGCTGCTGCGCACCGTCCGGTTCC...

Zm00001d007264_T001 from maize genome v4

Amino Acid Sequence
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MLLRTVRFLCSVVAAFARLVRELRKAGVMLSACSPSPVAILSAPTVPAASPINLIASTPLPKRKKTLARVAILENLLAAP
PTTLLPPSLVVGLPAKVSDVVSEAAMVEQQQAAQSLMKKASLAARRRPARLVIPVGDDAGEVAAGWGAAAAPAKEADVEV
EGEGFSLASRAGPRHAMEDAYAVVTDADSQLAFYGVFDGHGGRAAVDFVSERLSKNVVSAVLAAAGKDTRCEASSSGDDD
AVSAAIRAAYLATDSELLTQHQQGASGGACAATAVVKGGDLYVAHLGDCRVVLSREGAAVALTADHTCAAEDERARIERE
GGYVSRSGSGVWRVQGSLAVSRAFGDGALKQWVISEPAVTRVPLAAGCEFLVIASDGLWDKVSNQEAIDAVSGGRSRAAS
CRDLVDMARRRGSRDDVTVMVVDLQRFVR

Nucleotide Sequence
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ATGCTGCTGCGCACCGTCCGGTTCC...

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Protein ZmOrphan127

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmOrphan127 is the regulator

Interactions where ZmOrphan127 is the target
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Zm00001eb112250_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G342197_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d007264_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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